基于人类全基因表达谱技术对“肾精亏虚证”原发性骨质疏松患者差异基因表达分析
Gene expression analysis in patients with primary osteoporosis due to kidney-essence deficiency based on human genome expression array
  
DOI:10.3969/j.issn.1006.7108.2018.09.012
中文关键词:  肾精亏虚  骨质疏松  高通量  差异基因
英文关键词:kidney-essence deficiency  osteoporosis  high-through put  differential gene
基金项目:国家自然科学基金(81273612);国家973计划(2010CB530401)
作者单位
辛华 谢晚晴 蒋宁 孙丽 郑洪新* 辽宁中医药大学辽宁 沈阳 110032 
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中文摘要:
      目的 基于人类全基因表达谱芯片高通量测序技术,检测肾精亏虚证骨质疏松患者和同龄健康状态老年人血液中的差异基因表达,探讨肾精亏虚证骨质疏松症的发病机制,为中医药防治该病证提供可能的作用靶点。方法 从辽宁中医药大学附属医院和上海中医药大学附属龙华医院门诊肾精亏虚证原发性骨质疏松症患者群中随机选择16例患者,男女各半,年龄60岁以上,作为OP组(OP group);同龄健康状态老年人24例,男女各半,年龄60岁以上,作为对照组。采用人类全基因表达谱芯片检测两组人群的差异基因表达,并对差异显著的基因表达进行荧光定量PCR验证。结果 在肾精亏虚证OP患者中共有602个基因呈现差异性表达,其中上调基因579个,下调基因23个(FC≥1.5或FC≤0.667,q-value≤5%)。表达上调超过3倍的基因有7个,分别为S100P、SNX3、DEFA1、MMP9、ANXA3、IL1R2、PLSCR1;表达下调超过2倍的基因有3个,分别为CX3CR1、SPON2、GNLY。对以上10个差异显著的基因进行RT-PCR验证,结果与基因芯片检测结果一致。结论 肾精亏虚证OP患者与同龄健康老年人比较,差异基因表达上调或下调显著,这些基因通过调控免疫应答、防御应答、趋化因子信号转导通路等方面在肾精亏虚证OP的发病过程中可能发挥着重要的作用。
英文摘要:
      Objective To examine the gene expression profile in the blood of patients with osteoporosis and kidney-essence deficiency (OP-KED) based on high-through human genome expression array, and to explore the mechanism of OP-KED and possible treatment target. Methods Sixteen OP-KED patients (8 males and 8 females) aged over 60 years old, and 24 healthy people (12 males and 12 females) of same age were recruited from the First Affiliated Hospital of Liaoning University of Traditional Chinese Medicine and Longhua Hospital Affiliated to Shanghai University of Traditional Chinese Medicine. Differential gene expression was examined using the Human Gene Expression Array chip. Real-time PCR was used to validate the expression of differentially expressed genes. Results Six hundred and two genes were differentially expressed in OP-KED patients. Among those, 579 genes were up regulated and 23 genes were down regulated (FC≥1.5 or FC≤0.667, q value≤5%). Seven genes, including S100P, SNX3, DEFA1, MMP9, ANXA3, IL1R2, and PLSCR1, were up regulated over 3 times. Three genes, including CX3CR1, SPON2, and GNLY, were down regulated more than 2 times. The expression patterns of the above 10 genes were confirmed by real-time PCR. Conclusion Comparing with that in the healthy elder people of same age, the gene expression pattern in OP-KED patients is different significantly. These genes play important role in the development of OP-KED by regulation of immune response, defense response, and signal transduction of many intracellular proteins.
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