绝经后骨质疏松症差异表达lncRNAs及其靶基因抑瘤素M在外周血的表达研究
Differential expression of lncRNAs and its target gene oncostatin M in peripheral blood in postmenopausal osteoporosis
  
DOI:10.3969/j.issn.1006-7108.2021.03.010
中文关键词:  长链非编码RNA  抑瘤素M  绝经后骨质疏松症  RNA二级结构  lncRNA TTC28-AS1  linc-IRF2BP2-1  linc-FAM126B-1
英文关键词:long chain non-coding RNA  oncostatin M  postmenopausal osteoporosis  RNA secondary structure  lncRNA TTC28-AS1  linc-IRF2BP2-1  linc-FAM126B-1
基金项目:国家自然科学基金资助项目(81774350);福建省自然科学基金项目(2019J01339);福建省科技厅省属公益类科研院所基本科研专项(2019R1003-1)
作者单位
李生强 谢冰颖 陈娟 谢丽华 叶云金 黄景文 葛继荣* 福建省中医药科学院骨质疏松证候基因组学研究室,福建 福州350003 
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中文摘要:
      目的 探讨绝经后骨质疏松症差异表达lncRNAs及其靶基因抑瘤素M(oncostatin M, OSM)在绝经后骨质疏松症外周血的表达及其意义。方法 在前期lncRNA-mRNA芯片检测绝经后骨质疏松症差异lncRNAs并进行共表达分析的基础上,利用blat软件分析lncRNA TTC28-AS1、linc-IRF2BP2-1、linc-FAM126B-1靶基因;RNAfold 预测其二级结构;随机选择绝经后妇女受试者,检测骨密度,正常骨密度妇女25例为对照组,骨质疏松症患者25例为骨质疏松症组;定量PCR检测两组人群外周血lncRNA TTC28-AS1、linc-IRF2BP2-1、linc-FAM126B-1及抑瘤素M的表达。结果 blat 软件预测lncRNA TTC28-AS1、linc-IRF2BP2-1、linc-FAM126B-1的靶基因为 OSM,相关系数分别为0.8506(P=0.0037)、0.9314(P=0.0003)及0.9222(P=0.0004);RNAfold预测3个lncRNAs均具有多个茎环、多分枝内部环结构;lncRNA TTC28-AS1、linc-IRF2BP2-1、linc-FAM126B-1及其靶基因抑瘤素M在骨质疏松症组中表达水平均显著低于对照组(P值均小于0.05)。结论 lncRNA TTC28-AS1、linc-IRF2BP2-1、linc-FAM126B-1及其靶基因抑瘤素M表达下调可能与绝经后骨质疏松症存在相关性。
英文摘要:
      Objective Our aim is to investigate the expression and significance of differential expressed long-chain non-coding RNAs and oncostatin M (OSM) in postmenopausal osteoporosis. Methods Based on the detection of lncRNAs with lncRNA-mRNA chip and co-expression analysis, the target genes lncRNA TTC28-AS1, linc-IRF2BP2-1, and linc-FAM126B-1 were analyzed with a blat software. The secondary structure of lncRNAs was predicted with an online software RNAfold. The subjects were randomly selected from the postmenopausal women, and their BMD was measured. Twenty-five women with normal BMD were included in the control group. Twenty-five patients with osteoporosis were included in the osteoporosis group. The expression of oncostatin M and lncRNA TTC28-AS1, linc-IRF2BP2-1, and linc-FAM126B-1 in the two groups were detected with quantitative PCR. Results Blat software predicted that the target of lncRNA TTC28-AS1, linc-IRF2bp2-1, and linc-FAM126B-1 was OSM, and the correlation coefficients were 0.8506 (P = 0.0037), 0.9314 (P = 0.0003), and 0.9222 (P = 0.0004) respectively. RNAfold predicted that all the 3 lncRNAs had multiple stem rings and multi-branched internal ring structures. The expression levels of OSM, lncRNA TTC28-AS1, linc-IRF2bp2-1, and linc-FAM126B-1 in postmenopausal osteoporosis group were significantly lower than those in the control group (P < 0.05). Conclusion The down-regulation of lncRNA TTC28-AS1, linc-IRF2BP2-1, linc-FAM126B-1, and their target gene oncostatin M may be related to postmenopausal osteoporosis.
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