Objective To detect the m6A methylation modification and gene expression changes of the bone tissue mRNA in postmenopausal rats using epitranscriptomics microarray technology. Methods Female SPF rats were randomly divided into model group and Xuling strong-bong formula group. The postmenopausal osteoporosis model was constructed using ovarian removal method. In this study, rats in the treatment group received the same amount of normal saline. MeRIP-qPCR and epitranscriptomics microarray technology were used to detect the m6A methylation and expression level changes of mRNA in the bone tissues of rats in the two groups. mRNAs were analyzed with GO and KEGG. Six differential methylated genes were selected for verification based on the detection results. Results Compared with those in the control group, a total of 4479 differentially expressed mRNAs were in the Xuling group, of which 2298 were up-regulated and 1497 were down-regulated. The m6A methylation modification levels of 1215 genes were significantly changed, including 592 hypermethylation and 623 hypomethylation. The joint analysis showed that 825 genes had mRNA expression and m6A modification changes at the same time. Among those, 433 m6A were hypermethylated and mRNA expression was up-regulated, and 392 m6A were hypomethylated and mRNA expression was down-regulated. GO and KEGG analysis showed that m6A hypermethylated and up-regulated genes were involved in bone marrow cell differentiation, cytochrome C release in mitochondria, and red blood cell differentiation. m6A hypomethylated and down-regulated genes were involved in the regulation of triglyceride catabolism, PPAR, phosphatidylinositol, thyroid hormone, cholesterol metabolism, and other signaling pathways. MeRIP-qPCR showed that the relative m6A methylation levels of Ggt1, Hps4, H1fx, Selp, and Hras were higher than those in the control group. Conclusion Xuling strong-bone formula has a significant effect on the methylation of m6A in the bone tissue of postmenopausal osteoporosis rats. The m6A methylation modification of Ggt1, Hps4, H1fx, selp, Hras and other genes may be one of the mechanisms for the treatment of PMOP. |